Publications, Posters, <br> and Other Information
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Publications and Posters

Sequential MALDI-HiPLEX-IHC and Untargeted Spatial Proteomics Mass Spectrometry Imaging to Detect Proteomic Alterations Associated with Tumour Infiltrating Lymphocytes
January 3, 2025  •  Bindi, G., Monza, N., de Oliveira, G. S., Denti, V., Fatahian, F., Seyed-Golestan, S.-M. J., L’Imperio, V., Pagni, F., & Smith, A. (2025). In Journal ...
How can MSI enhance our understanding of ASO distribution?
January 1, 2025  •  van der Vloet, L., Hilaire, P. B. S., Bouillod, C., Isin, E. M., Heeren, R. M. A., & Vandenbosch, M. (2025).   In Drug Discovery Today ...
Multiplexed and Multiomic Mass Spectrometry Imaging of MALDI-IHC Photocleavable Mass Tag Tissue Probes, N-Glycomics, and the Extracellular Matrisome from FFPE Tissue Sections
December 24, 2024  •  Taylor, H. B., Dunne, J. B., Lim, M. J., Yagnik, G., Rothschild, K. J., Mehta, A., Drake, R. R., & Angel, P. M. (2024). In Methods in Molecular Biology (pp. 305–332). Springer US. • Multiomic and Multimodal techniques
Exploring the Aβ Plaque Microenvironment in Alzheimer’s Disease Mice by Multimodal Lipid-Protein-Histology Imaging on a Benchtop Mass Spectrometer
December 7, 2024  •  Müller, E., Enzlein, T., Niemeyer, D., von Ammon, L., Stumpo, K., Biber, K., Klein, C., & Hopf, C. (2024). Cold Spring Harbor Laboratory. • Multiomic and Multimodal techniques
MALDI-IHC high-plex protein biomarker imaging for fast, non-iterative identification of lung carcinoma subtype
November 13, 2024  •  AACR 2024 • Catherine A. Kita, Leonardo G. Dettori, Kristina Schwamborn, Gargey Yagnik, Kenneth J. Rothschild, Mark J. Lim
Single Cell MALDI-MSI Analysis of Lipids and Proteins within a Replicative Senescence Fibroblast Model
October 30, 2024  •  Sekera, E. R., Rosas, L., Holbrook, J. H., Angeles-Lopez, Q. D., Khaliullin, T., Rojas, M., Mora, A. L., & Hummon, A. B. (2024). In Journal of the American Society for Mass Spectrometry. American Chemical Society (ACS). • Multiomic, Lipids, Proteins, Single-Cell
Targeting ferroptosis with the lipoxygenase inhibitor PTC-041 as a therapeutic strategy for the treatment of Parkinson’s disease
September 18, 2024  •  Minnella, A., McCusker, K. P., Amagata, A., Trias, B., Weetall, M., Latham, J. C., O’Neill, S., Wyse, R. K., Klein, M. B., & Trimmer, J. K. (2024). In H. Nakano (Ed.), PLOS ONE (Vol. 19, Issue 9, p. e0309893). Public Library of Science (PLoS). • Drug study incorporating MALDI-IHC, Pharma
MALDI Imaging applications on a new benchtop MALDI axial TOF instrument
September 9, 2024  •  IMSIS 2024 • Oetjen, Janina, Wendik, Björn, Henkel, Corinna, Kiss, Andras, Nordmann, Christoph, Böhm, Sebastian, Haase, Andreas, Kobarg, Jan Hendrik, Boskamp, Tobias, Schweiger Hufnagel, Ulrike, ...
Mass spectrometry imaging for spatially resolved multi-omics molecular mapping
July 17, 2024  •  Zhang, H., Lu, K.H., Ebbini, M. et al. npj Imaging 2, 20 (2024). • Multiomic, Review Article
Gel-assisted mass spectrometry imaging enables sub-micrometer spatial lipidomics
June 12, 2024  •  Chan, Y. H., Pathmasiri, K. C., Pierre-Jacques, D., Hibbard, M. C., Tao, N., Fischer, J. L., Yang, E., Cologna, S. M., & Gao, R. (2024). In Nature Communications (Vol. 15, Issue 1). Springer Science and Business Media LLC. • Multiomic, GAMSI, Expansion-Microscopy, Lipids, Proteins
Multimodal Omics Imaging of Human Brain Using MALDI HiPLEX-IHC
June 2, 2024  •  ASMS 2024 • Yumiko Toyama, Takashi Nirasawa, Shigeo Murayama, Yuko Saito, Maho Morishima, Masaya Ikegawa
Multiplex and multiomic MS imaging of drugs, metabolites, and immunolabeled pathogenic protein markers within a single tissue section
June 2, 2024  •  ASMS 2024 • Prem Shankar; Reina N Paez; David Beaver; Bandana Bera; Brendan Prideaux
Combining Drug and Targeted Protein Imaging to Uncover Molecular Changes Associated with Cancer Treatment
June 2, 2024  •  ASMS 2024 • Erin H. Seeley, Catherine A. Kita, Gargey Yagnik, Kenneth J. Rothschild, Mark J. Lim, Rahul A. Sheth
MALDI-ICC and SpaceM on PBMCs Spiked with Cancer Cells for Highly Multiplexed, Multiomic and Multimodal Single-Cell Profiling
June 2, 2024  •  ASMS 2024 • Ziying Liu, Gargey Yagnik, Sharath K. Menon, Shawn Owens, Leonardo G. Dettori, Philip Carvalho, Kenneth J. Rothschild, Theodore Alexandrov, and Mark J. ...
Cyclic MALDI-IHC for Successive High-plex and Multimodal Imaging of Tissues and Tissue Microarrays
June 2, 2024  •  ASMS 2024 • Leonardo G. Dettori, Gargey Yagnik, Philip Carvalho, Mark J. Lim and Kenneth J. Rothschild
Real-time glioblastoma tumor microenvironment assessment by SpiderMass for improved patient management
April 16, 2024  •  Zirem, Y., Ledoux, L., Roussel, L., Maurage, C. A., Tirilly, P., Le Rhun, É., Meresse, B., Yagnik, G., Lim, M. J., Rothschild, K. J., Duhamel, M., Salzet, M., & Fournier, I. (2024). In Cell Reports Medicine (Vol. 5, Issue 4, p. 101482). Elsevier BV. • MALDI-IHC was orthogonal verification tech
Molecular analysis of the extracellular microenvironment: from form to function
March 1, 2024  •  Macdonald, J. K., Mehta, A. S., Drake, R. R., & Angel, P. M. (2024). In FEBS Letters (Vol. 598, Issue 6, pp. 602–620). Wiley. • Multiomics, Tools to be used for studying tumor ECM inc. MALDI-IHC
Quantitative mass spectrometry imaging: therapeutics & biomolecules
January 22, 2024  •  Holbrook, J. H., Kemper, G. E., & Hummon, A. B. (2024). In Chemical Communications (Vol. 60, Issue 16, pp. 2137–2151). Royal Society of Chemistry (RSC). • Review Article
Technology Spotlight: Advances in Proteomic Technologies and Their Applications in Hematology
January 17, 2024  •  Mangalaparthi, K. K., & Pandey, A. (2024). In The Hematologist (Vol. 21, Issue 1). American Society of Hematology. • Review Article
Utilizing multimodal mass spectrometry imaging for profiling immune cell composition and N-glycosylation across colorectal carcinoma disease progression
January 10, 2024  •  Young, L. E. A., Nietert, P. J., Stubler, R., Kittrell, C. G., Grimsley, G., Lewin, D. N., Mehta, A. S., Hajar, C., Wang, K., O’Quinn, E. C., Angel, P. M., Wallace, K., & Drake, R. R. (2024). In Frontiers in Pharmacology (Vol. 14). Frontiers Media SA. • Multiomic, Multimodal
A novel 3D imaging method to establish baseline amyloid‐beta plaque load and analyze compound efficacy in pre‐clinical Alzheimer’s disease animal models
December 24, 2023  •  Ferron, G., Linehan, S. T., Ragan, T., Elk, K. J., Garceau, D., & Sasner, M. (2023). In Alzheimer’s & Dementia (Vol. 19, Issue S10). Wiley. • Published Abstract
Lipidomic Phenotyping Of Human Small Intestinal Organoids Using Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging
December 7, 2023  •  Duivenvoorden, A. A. M., Claes, B. S. R., van der Vloet, L., Lubbers, T., Glunde, K., Olde Damink, S. W. M., Heeren, R. M. A., & Lenaerts, K. (2023). In Analytical Chemistry (Vol. 95, Issue 50, pp. 18443–18450). American Chemical Society (ACS). • Multiomic, Organoids, Lipids, Proteins
A Guide to MALDI Imaging Mass Spectrometry for Tissues
October 25, 2023  •  Jessica L. Moore, Georgia Charkoftaki. Journal of Proteome Research 2023, 22 (11) , 3401-3417. • Review Article
Combination of Multimodal Single Cell Imaging Methods with Multiplexed Enzyme-based MALDI-Mass Spectrometry Imaging for Translational Studies
October 23, 2023  •  IMSIS 2023 • Jaclyn B. Dunne, Jake Griner, Martin Romeo, Carsten Krieg, Mark Lim, Gargey Yagnik Anand S. Mehta, Richard R. Drake, Peggi M. Angel
Evaluation of antibody-based single cell type imaging techniques coupled to multiplexed imaging of N-glycans and collagen peptides by matrix-assisted laser desorption/ionization mass spectrometry imaging
October 16, 2023  •  Dunne, J., Griner, J., Romeo, M., Macdonald, J., Krieg, C., Lim, M., Yagnik, G., Rothschild, K. J., Drake, R. R., Mehta, A. S., & Angel, P. M. (2023). In Analytical and Bioanalytical Chemistry (Vol. 415, Issue 28, pp. 7011–7024). Springer Science and Business Media LLC. • Multiomic, Multimodal techniques
Towards Single-Cell MALDI HiPLEX-IHC: Multiplexed, Multiomic and Multimodal Imaging of Targeted Intact Proteins and Untargeted Metabolites
September 17, 2023  •  HUPO 2023 • Mark Lim, Gargey Yagnik, Zhi Wan, Jonathan Bell, Joshua Fischer, Ethan Yang, Katherine A. Stumpo, Kenneth J. Rothschild
Gel-assisted mass spectrometry imaging
June 3, 2023  •  Chan, Y. H., Pathmasiri, K. C., Pierre-Jacques, D., Cologna, S. M., & Gao, R. (2023). Cold Spring Harbor Laboratory. • Multiomic and Multimodal techniques
MALDI HiPLEX-IHC: multiomic and multimodal imaging of targeted intact proteins in tissues
May 1, 2023  •  Lim, M. J., Yagnik, G., Henkel, C., Frost, S. F., Bien, T., & Rothschild, K. J. (2023). In Frontiers in Chemistry (Vol. 11). Frontiers Media SA. • Multiomic and Multimodal techniques
MALDI-IHC-Guided In-Depth Spatial Proteomics: Targeted and Untargeted MSI Combined
January 13, 2023  •  Claes, B. S. R., Krestensen, K. K., Yagnik, G., Grgic, A., Kuik, C., Lim, M. J., Rothschild, K. J., Vandenbosch, M., & Heeren, R. M. A. (2023). In Analytical Chemistry (Vol. 95, Issue 4, pp. 2329–2338). American Chemical Society (ACS). • Multimodal, proteins, lipids
MALDI-IHC-Guided In-Depth Spatial Proteomics
January 1, 2023  •  B.S.R. Claes, K. K. Krestensen, G. Yagnik, A Grgic, C. Kuik, M.J. Lim , K.J. Rothschild, M. Vandenbosch, R.M.A. Heeren
MALDI HiPLEX-IHC: Highly Multiplex & Multiomic Tissue Imaging with Photocleavable Mass-Tagged Probes
June 5, 2022  •  ASMS 2022 • Gargey B. Yagnik; Ziying Liu; Zhi Wan; Kenneth J. Rothschild, Mark J. Lim
Highly Multiplexed Immunohistochemical MALDI-MS Imaging of Biomarkers in Tissues
February 25, 2021  •  Yagnik, G., Liu, Z., Rothschild, K. J., & Lim, M. J. (2021). In Journal of the American Society for Mass Spectrometry (Vol. 32, Issue 4, pp. 977–988). American Chemical Society (ACS). • MALDI-IHC overview